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asankaan
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Joined: 17 Jul 2006
Posts: 60

PostPosted: Mon Dec 02, 2024 6:52 am    Post subject: glibc update from 2.36-r5 Reply with quote

Hi,

I want to update sys-libs/glibc from 2.36-r5 to latest (2.40-r5).
The following error occurs when I try the update:
Code:

!!! The following installed packages are masked:
- sys-libs/glibc-2.36-r5::gentoo (masked by: package.mask)
/var/db/repos/gentoo/profiles/package.mask:
# Andreas K. Hüttel <dilfridge@gentoo.org> (2017-05-21)
# (and others, updated later)
# These old versions of toolchain packages (binutils, gcc, glibc) are no
# longer officially supported and are not suitable for general use. Using
# these packages can result in build failures (and possible breakage) for
# many packages, and may leave your system vulnerable to known security
# exploits.
# If you still use one of these old toolchain packages, please upgrade (and
# switch the compiler / the binutils) ASAP. If you need them for a specific
# (isolated) use case, feel free to unmask them on your system.


emerge --info
Code:

emerge --info
Portage 3.0.66.1 (python 3.12.7-final-0, default/linux/amd64/23.0/split-usr, gcc-12, glibc-2.36-r5, 6.1.12-gentoo-x86_64 x86_64)
=================================================================
System uname: Linux-6.1.12-gentoo-x86_64-x86_64-Intel-R-_Xeon-R-_CPU_E5645_@_2.40GHz-with-glibc2.36
KiB Mem:     8133400 total,    859336 free
KiB Swap:   16777212 total,  16774372 free
Timestamp of repository gentoo: Mon, 25 Nov 2024 05:00:00 +0000
Head commit of repository gentoo: efb66803372782dc62c4ec695e3e66b5a9cc525e
sh bash 5.2_p37
ld GNU ld (Gentoo 2.37_p1 p2) 2.37
app-misc/pax-utils:        1.3.8::gentoo
app-shells/bash:           5.2_p37::gentoo
dev-build/autoconf:        2.71-r5::gentoo, 2.72-r1::gentoo
dev-build/automake:        1.16.5-r2::gentoo
dev-build/cmake:           3.25.2::gentoo
dev-build/libtool:         2.4.7-r4::gentoo
dev-build/make:            4.4.1-r100::gentoo
dev-build/meson:           1.5.2::gentoo
dev-lang/perl:             5.40.0::gentoo
dev-lang/python:           3.9.20_p2::gentoo, 3.10.15_p2::gentoo, 3.11.10_p1::gentoo, 3.12.7_p1::gentoo, 3.13.0::gentoo
sys-apps/baselayout:       2.17::gentoo
sys-apps/openrc:           0.54.2::gentoo
sys-apps/sandbox:          2.39::gentoo
sys-devel/binutils:        2.37_p1-r2::gentoo, 2.38-r2::gentoo, 2.39-r4::gentoo, 2.42-r2::gentoo
sys-devel/binutils-config: 5.5.2::gentoo
sys-devel/gcc:             11.3.0::gentoo, 12.2.1_p20230121-r1::gentoo
sys-devel/gcc-config:      2.11::gentoo
sys-kernel/linux-headers:  6.6-r1::gentoo (virtual/os-headers)
sys-libs/glibc:            2.36-r5::gentoo
Repositories:

gentoo
    location: /var/db/repos/gentoo
    sync-type: rsync
    sync-uri: rsync://rsync.gentoo.org/gentoo-portage
    priority: -1000
    volatile: False
    sync-rsync-verify-metamanifest: yes
    sync-rsync-verify-max-age: 3
    sync-rsync-verify-jobs: 1
    sync-rsync-extra-opts:

ACCEPT_KEYWORDS="amd64"
ACCEPT_LICENSE="*"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-O2 -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/share/gnupg/qualified.txt /var/bind"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/gconf /etc/gentoo-release /etc/php/apache2-php8.0/ext-active/ /etc/php/apache2-php8.1/ext-active/ /etc/php/cgi-php8.0/ext-active/ /etc/php/cgi-php8.1/ext-active/ /etc/php/cli-php8.0/ext-active/ /etc/php/cli-php8.1/ext-active/ /etc/php/fpm-php8.0/ext-active/ /etc/php/fpm-php8.1/ext-active/ /etc/php/phpdbg-php8.0/ext-active/ /etc/php/phpdbg-php8.1/ext-active/ /etc/sandbox.d /etc/terminfo"
CXXFLAGS="-O2 -pipe"
DISTDIR="/var/cache/distfiles"
ENV_UNSET="CARGO_HOME DBUS_SESSION_BUS_ADDRESS DISPLAY GDK_PIXBUF_MODULE_FILE GOBIN GOPATH PERL5LIB PERL5OPT PERLPREFIX PERL_CORE PERL_MB_OPT PERL_MM_OPT XAUTHORITY XDG_CACHE_HOME XDG_CONFIG_HOME XDG_DATA_HOME XDG_RUNTIME_DIR XDG_STATE_HOME"
FCFLAGS="-O2 -pipe"
FEATURES="assume-digests binpkg-docompress binpkg-dostrip binpkg-logs buildpkg-live config-protect-if-modified distlocks ebuild-locks fixlafiles ipc-sandbox merge-sync merge-wait multilib-strict network-sandbox news parallel-fetch pid-sandbox pkgdir-index-trusted preserve-libs protect-owned qa-unresolved-soname-deps sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-O2 -pipe"
GENTOO_MIRRORS="http://distfiles.gentoo.org"
LANG="C.utf8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed -Wl,-z,pack-relative-relocs"
LEX="flex"
MAKEOPTS="-j6"
PKGDIR="/var/cache/binpkgs"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git"
PORTAGE_TMPDIR="/var/tmp"
SHELL="/bin/bash"
USE="X acl amd64 apache2 bindist bzip2 cet crypt dbus gdbm gdu hal iconv ipv6 libtirpc mmx multilib ncurses nls openmp pam pcre php png readline seccomp snmp split-usr sse sse2 ssl test-rust truetype unicode xattr zlib" ABI_X86="64" ADA_TARGET="gcc_12" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_anon authn_dbm authn_file authz_dbm authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir env expires ext_filter file_cache filter headers include info log_config logio mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="karbon sheets words" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="mmx mmxext sse sse2" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock greis isync itrax navcom oceanserver oncore rtcm104v2 rtcm104v3 sirf skytraq superstar2 tsip tripmate tnt ublox" GUILE_SINGLE_TARGET="3-0" GUILE_TARGETS="3-0" INPUT_DEVICES="libinput" KERNEL="linux" LCD_DEVICES="bayrad cfontz glk hd44780 lb216 lcdm001 mtxorb text" LUA_SINGLE_TARGET="lua5-1" LUA_TARGETS="lua5-1" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php8-2" POSTGRES_TARGETS="postgres16" PYTHON_SINGLE_TARGET="python3_12" PYTHON_TARGETS="python3_12" RUBY_TARGETS="ruby32" VIDEO_CARDS="amdgpu fbdev intel nouveau radeon radeonsi vesa dummy" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipp2p iface geoip fuzzy condition tarpit sysrq proto logmark ipmark dhcpmac delude chaos account"
Unset:  ADDR2LINE, AR, ARFLAGS, AS, ASFLAGS, CC, CCLD, CONFIG_SHELL, CPP, CPPFLAGS, CTARGET, CXX, CXXFILT, ELFEDIT, EMERGE_DEFAULT_OPTS, EXTRA_ECONF, F77FLAGS, FC, GCOV, GPROF, INSTALL_MASK, LC_ALL, LD, LFLAGS, LIBTOOL, LINGUAS, MAKE, MAKEFLAGS, NM, OBJCOPY, OBJDUMP, PORTAGE_BINHOST, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, PYTHONPATH, RANLIB, READELF, RUSTFLAGS, SIZE, STRINGS, STRIP, YACC, YFLAGS


Can anyone guide me on how to overcome this error?

Thank you in advance!
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fedeliallalinea
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Posts: 31300
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PostPosted: Mon Dec 02, 2024 7:03 am    Post subject: Reply with quote

Can you post emerge -uUDp @world command output?
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asankaan
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Joined: 17 Jul 2006
Posts: 60

PostPosted: Mon Dec 02, 2024 7:17 am    Post subject: Reply with quote

fedeliallalinea wrote:
Can you post emerge -uUDp @world command output?


Code:
[ebuild     U  ] sys-apps/shadow-4.14.8 [4.13-r2] USE="-systemd%"
[ebuild     U  ] sys-auth/passwdqc-2.0.3-r1 [2.0.2-r1]
[ebuild     U  ] net-proxy/squid-6.12 [6.5] USE="-verify-sig%"
[ebuild     U  ] net-mail/mailutils-3.17-r100 [3.15] USE="-test%" GUILE_SINGLE_TARGET="3-0%* -2-2%" PYTHON_SINGLE_TARGET="python3_12%* -python3_10*"
[ebuild     U  ] app-arch/brotli-1.1.0 [1.0.9-r5] USE="-debug%" PYTHON_TARGETS="python3_12%* -python3_10* -python3_13%"
[ebuild     U  ] dev-build/cmake-3.30.5 [3.25.2] USE="-dap% -gui% -qt6%"
[ebuild     U  ] net-libs/nghttp2-1.62.1 [1.51.0] USE="-systemd%"
[ebuild     U  ] www-servers/apache-2.4.62 [2.4.55-r1] APACHE2_MODULES="-allowmethods% (-tls)"
[ebuild     U  ] media-libs/libjpeg-turbo-3.0.3-r1 [2.1.4]
[ebuild  NS    ] dev-lang/php-8.2.24 [8.0.16-r1, 8.1.12] USE="-avif% -valgrind%"
[ebuild  N     ] net-libs/nghttp3-1.6.0  USE="-static-libs -test" ABI_X86="(64) -32 (-x32)"
[ebuild  N     ] dev-libs/json-c-0.18  USE="-doc -static-libs -threads" ABI_X86="(64) -32 (-x32)" CPU_FLAGS_X86="-rdrand"
[ebuild     U  ] net-dns/bind-9.18.29-r2 [9.16.37] USE="-doh% -idn% (-jemalloc)"
[ebuild     U  ] net-dns/bind-tools-9.18.0 [9.16.37-r1]
[blocks b      ] <net-dns/bind-tools-9.18.0 ("<net-dns/bind-tools-9.18.0" is soft blocking net-dns/bind-9.18.29-r2)
[ebuild     U  ] net-misc/curl-8.10.1-r1 [7.87.0-r2] USE="alt-svc* hsts* http3%* psl%* quic%* websockets* -debug%" CURL_QUIC="openssl%* -ngtcp2%"
[ebuild     U  ] www-servers/lighttpd-1.4.76-r1 [1.4.67] USE="-libdeflate% -verify-sig%"
[ebuild     U  ] media-libs/gd-2.3.3-r4 [2.3.3-r3]
[ebuild     U  ] sys-apps/dbus-1.15.8 [1.15.2] USE="-valgrind%"
[ebuild     U  ] x11-libs/libX11-1.8.10 [1.8.1]
[ebuild     U  ] x11-libs/libXt-1.3.0 [1.2.1]
[ebuild     U  ] x11-libs/libXext-1.3.6 [1.3.5]
[ebuild     U  ] x11-libs/libXmu-1.2.1 [1.1.4] USE="-test%"
[ebuild     U  ] x11-libs/libXpm-3.5.17 [3.5.14] USE="-test%"
[ebuild     U  ] x11-libs/libXaw-1.0.16 [1.0.14]
[ebuild     U  ] x11-libs/libXdmcp-1.1.5 [1.1.4-r2]
[ebuild     U  ] x11-libs/libxcb-1.17.0 [1.15-r1]
[ebuild     U  ] x11-misc/compose-tables-1.8.10 [1.8.3]
[ebuild     U  ] sys-libs/glibc-2.40-r5 [2.36-r5] USE="cet* -perl%"
[blocks b      ] <sys-libs/glibc-2.38 ("<sys-libs/glibc-2.38" is soft blocking sys-apps/shadow-4.14.8)
[ebuild  NS    ] sys-devel/gcc-14.2.1_p20241116 [11.3.0, 12.2.1_p20230121-r1] USE="cet* (default-stack-clash-protection*) (default-znow*) zstd* -modula2% -rust% (-time64)"
[ebuild     U  ] sys-libs/libxcrypt-4.4.36-r3 [4.4.28-r2]
[blocks b      ] sys-libs/glibc[crypt(+)] ("sys-libs/glibc[crypt(+)]" is soft blocking sys-libs/libxcrypt-4.4.28-r2)
[ebuild     U  ] sys-kernel/genkernel-4.3.16 [4.2.6-r8] PYTHON_SINGLE_TARGET="python3_12%* -python3_10* -python3_11%"
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fedeliallalinea
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PostPosted: Mon Dec 02, 2024 7:47 am    Post subject: Reply with quote

It seems to me that you can do the update without any problems.
The message you received warns you to update glibc as soon as possible since you are using an obsolete version.
Also I see that you never even activated the most recent version of binutils with the eselect binutils command, again you are using an obsolete version.
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