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Resonant
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PostPosted: Sat Jan 29, 2005 4:46 am    Post subject: Best way to make a folding farm? Reply with quote

I want to make a rig for Folding@Home, but I do not know of the best way to go about doing it. I was thinking of SMP, but that was only for multiple processors on a motherboard. Then, I started thinking about maybe doing a cluster. We were planning on purchasing ~3-5 seperate 2 Ghz systems, and linking them with something like LTSP. Does anyone have any advice or past experiences? Is there anyway to do this with Gentoo?

http://folding.stanford.edu/faq.html says:


Quote:
The main aspect to consider is to make sure that the CPUID for each machine is unique.


Does this mean if I buy three identical systems, the F@H will not work?

Thanks in Advanced. :D
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SerfurJ
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PostPosted: Sat Jan 29, 2005 5:15 am    Post subject: Reply with quote

i think this is your answer (further down in that paragraph):
Code:
3) For a Linux cluster, make sure that if you copy the directory, you DON'T copy the
MachineDependent.dat file. This file will be autogenerated by the client to get a new
ID.


just out of curiosity.. you're buying these computers to run folding at home? that's great if so, but what's your motivation?
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Resonant
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PostPosted: Sat Jan 29, 2005 2:36 pm    Post subject: Reply with quote

Great, I feel stupid now for not reading down the paragraph. It was late at night, lol.

I think I'm probably gonna do an openMosix cluster, or something like Overclockix.

Oh, and my motiviation (not sure about my fathers), is that my friend's sister died a few months ago from cancer. I think it would be great to dedicate it to her, or something of the sort.
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blueSceaDa
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PostPosted: Sat Jan 29, 2005 2:54 pm    Post subject: Reply with quote

there is a project like seti@home which helps in finding medicines against cancer...
maybe you want to know that ... you could run in on that cluster then
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Resonant
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PostPosted: Sat Jan 29, 2005 3:17 pm    Post subject: Reply with quote

blueSceaDa wrote:
there is a project like seti@home which helps in finding medicines against cancer...
maybe you want to know that ... you could run in on that cluster then


Well, the title of the topic says Folding Farm so I guess I would want to use Folding@Home, right? Thanks the advice anyways. :wink:

I was looking more into the Gentoo Diskless / openMosix guide, and it says that I must set up a DHCP server on the master node, wouldn't that mean that I'd have to put the amount of network cards into the master node that I have clients? Would it be possible to just use a router then?
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NeddySeagoon
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PostPosted: Sat Jan 29, 2005 3:27 pm    Post subject: Reply with quote

Resonant,

You just use a router. DHCP runs for an interface, not a PC, so it will serve addresses in responce to broadcasts on eth0, say but not eth1.
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Resonant
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PostPosted: Sat Jan 29, 2005 3:39 pm    Post subject: Reply with quote

NeddySeagoon wrote:
Resonant,

You just use a router. DHCP runs for an interface, not a PC, so it will serve addresses in responce to broadcasts on eth0, say but not eth1.


Thanks Neddy, you've been a big help! :D
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NeddySeagoon
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PostPosted: Sat Jan 29, 2005 5:59 pm    Post subject: Reply with quote

Resonant,

I have a seti@home farm
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SerfurJ
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PostPosted: Sat Jan 29, 2005 6:58 pm    Post subject: Reply with quote

NeddySeagoon,

does that use a lot of electricity?
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NeddySeagoon
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PostPosted: Sat Jan 29, 2005 7:32 pm    Post subject: Reply with quote

SerfurJ,

Probably 60-80W per PC. I have 12 boxes, no keyboards, mice, monitors, mostly no video cards, CD-ROMS or floppies. I don't think I could take much more out. Making the boxes diskless would reduce the power further but thats a lot of work.
That costs about 7 pence per hour to run, total or about 1.70 UK Pounds per day.
PC power consumption has stayed fairly constant over the years.
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tkdfighter
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PostPosted: Sat Jan 29, 2005 10:39 pm    Post subject: Reply with quote

NeddySeagoon wrote:
Making the boxes diskless would reduce the power further but thats a lot of work.

Making them diskless would be a bit more work to get it working, but maintance should be easier (at least I think so).
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NeddySeagoon
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PostPosted: Sun Jan 30, 2005 10:19 am    Post subject: Reply with quote

tkdfighter,

The boxes are all different, ranging from a 486 to a P3. They are things I have picked up from family and friends over the years. Its not like they can share a kernel. If I aquire a diskless box at a time when I don't have a spare hdd, I would have a go at a diskless node.
With one disk shared over 12 or so PCs, when it fails, they all stop. That single point failure is a bad idea.
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syg00
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PostPosted: Sun Jan 30, 2005 10:50 am    Post subject: Reply with quote

NeddySeagoon wrote:
I have a seti@home farm.
I have 12 boxes, no keyboards, mice, monitors, ...

Man, that has to be a "bragging rights" winner at the local pub on a wintry evening 8)
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tkdfighter
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PostPosted: Sun Jan 30, 2005 2:43 pm    Post subject: Reply with quote

NeddySeagoon, you have a point there. I was thinking of a homogeneous cluster. :oops:
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DntKnwHw
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PostPosted: Mon Jan 31, 2005 2:45 pm    Post subject: Reply with quote

tried building a diskless cluster of 3, (all netboot) if you want, i will give you the how to's

you need 3, (installing gentoo, installing mosix and installing it diskless,) you can find this all in the gentoo documentations,

took me a lot of trial and error testing to get my cluster working, and if you are having 12 box, a good bet is using a Gigabit and raid,



http://www.gentoo.org/doc/en/handbook/2004.3/index.xml
http://www.gentoo.org/doc/en/openmosix-howto.xml
http://www.gentoo.org/doc/en/diskless-howto.xml
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tkdfighter
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PostPosted: Mon Jan 31, 2005 4:03 pm    Post subject: Reply with quote

I thought about building a openmosix cluster like that once, but I gave it up because I don't have that many computers and because for me (as a student) it's hard to justify spending a lot of money on something I just want to play around with. :(
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SerfurJ
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PostPosted: Mon Jan 31, 2005 4:34 pm    Post subject: Reply with quote

i made an openmosix cluster once. i thought it would speed up my computers for everyday use, but i don't use any apps that really take advantage of it. maybe it was because i don't have a gigabit network.
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blatch
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PostPosted: Tue Feb 01, 2005 3:41 am    Post subject: Reply with quote

I have an openmosix cluster in my dorm room. It gets really hot, and I have to shut it down at night cause it's too loud, but here are the specs: (I'll be folding once I get the bugs worked out)

6x1.2GHz Althon-Tbirds (yes tbirds, not mps)
3GB ram
250GB storage
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tkdfighter
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PostPosted: Tue Feb 01, 2005 3:36 pm    Post subject: Reply with quote

Nice! What will you be using it for (other than folding)?
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SerfurJ
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PostPosted: Thu Feb 03, 2005 5:32 pm    Post subject: Reply with quote

NeddySeagoon wrote:
Probably 60-80W per PC. I have 12 boxes, no keyboards, mice, monitors, mostly no video cards, CD-ROMS or floppies. I don't think I could take much more out. Making the boxes diskless would reduce the power further but thats a lot of work.
That costs about 7 pence per hour to run, total or about 1.70 UK Pounds per day.
PC power consumption has stayed fairly constant over the years.


NeddySeagoon,

is that just a guess or did you measure it? i'd like to find out how much electricity my computers are using.
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NeddySeagoon
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PostPosted: Thu Feb 03, 2005 8:17 pm    Post subject: Reply with quote

SerfurJ,

Its better than a WAG but its an estimate based on reading specificaions for the component parts for some of the PCs.
I'm not keen to measure it until the next power cut.
I suppose I can put a top limit on it by seeing how much power (kwH) I use overnight and divide by the time. Not much else runs overnight.
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SerfurJ
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PostPosted: Thu Feb 03, 2005 9:44 pm    Post subject: Reply with quote

NeddySeagoon wrote:
I suppose I can put a top limit on it by seeing how much power (kwH) I use overnight and divide by the time.

good idea, thanks. i'm going to give that a try.
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